Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_4866
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGGTTCATGATCGCGCAGGTCACGGCCGCCGCGCTGGCCAGTGAAAACAAGGCGCTGGCTCATCCGCACAGCGTCGACAGCCTGCCGACATCCGCCAAT CAGGAAGACCATGTGTCGATGGCCCCGGCCGCTGGCAAGCGGTTATGGGAAATGGCAGAAAACGTTCGCGGGATTCTTGCCGTAGAATGGTTGGCTGCCT GCCAGGGTCTGGACTTGCGTGAGGGTCTGAAAACCTCTCCGAAACTGGAGCAAGCCCGCAGCCTGTTGCGCAGCAAGGTCCCGTTCTATGAAAAGGACCG TTTTTTTGCACCGGACATCGAAGCTGCCAGTCAGCTGTTGTCCTCCACTTGCCTGAACCCGCTGGTTCCTGCACGTCTGCTACCGAGTTTGTGATGTACC GCGAGCCTGGCAGGGCTCGCTTTGGTCATTGCTGCGGGAAGCCGGTTGCAGGCGTTTTCGCGGCTTTTGCCATACCTGTATGTAATGAAATGGACCTGAA
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| DNA Sequence for Gene |
>PSPPH_4866
ATGACGTCACAAGATGGTTTGAAACGCGGGTTATCCGCCCGCCACATACGCTTCATGGCCCTGGGCTCTGCCATCGGCACAGGGTTGTTCTACGGCTCGG CCTCGGCGATTCAACAGGCCGGTCCGGCCGTATTGCTGGCGTACCTGATCGGCGGCGCGGCGGTGTACATGGTGATGCGCGCACTGGGCGAAATGGCCGT TCACGACCCGGTTTCCGGCTCGTTCAGCCATTACGCCACGCGCTACATGGGCCCGCTGGCCGGCTTCGTACTGGGCTGGACCTACGCATTCGAAATGATC ATTGTCTGCCTCGCCGACGTGACCGCATTCGGCATTTACATGGGCTTCTGGTTTCCGGAGGTGCCGCGCTGGATCTGGGTGCTGGGCATCGTGTTCCTGA TCGGCGCGCTCAACCTGTGCAATGTGAAAGTCTTCGGCGAAACCGAATTCTGGCTGTCGATCCTCAAGGTCAGCGCCATCGTGGCCATGATTGTCGCGGG CTTCGGCATCATGATCTTCGGCATCGGCAGCTCGACCAGCGGCACCGAAATAGGCATCAGCAACTTGTGGGCACACGGCGGCTTCATGCCCAACGGCGTC ACCGGCCTGATCGCTTCGTTTGCGGTGGTGATGTTTGCCTTCGGCGGCATCGAAATCATCGGCATCACGGCCGGTGAGGCAAAGGACCCGCAACGCAGCC TGCCACAGGCGATCAACGCCGTACCGTTGCGCATTCTGCTGTTCTATGTGCTGACACTGTTTGTGCTGATGTGCATTTACCCGTGGCCGCAGATCGGCAC CCAAGGCAGCCCGTTCGTGCAGATTTTCGACAATCTGGGCATTGCATCGGCGGCGACTATCCTCAATATCGTGGTCATCTCTGCTGCGGTGTCGGCCATC AACAGCGACATCTTCGGCGCCGGGCGCATGATGTACGGATTGGCCCGTGACGGTCAGGCACCCGCCAGTTTTGCGCGCCTGTCACGGCATGGTGTGCCGT GGATGACCGTGCTGGTCATGGGCATCGCGTTGCTGGGCGGCGTGCTGCTCAATTACCTGATCCCCAAGGACGTGTTCCTGCTGATCGCCTCGCTGGCAAC GTTTGCCACGGTCTGGGTCTGGCTGATGATTCTGCTCACCCAGGTTGCCATGCGCCGTTCGATGAACCGCGACGAGGCCGCACAACTGAAATTCGCGGTG CCGTTCTGGCCTTACGGACCGGCCGCCGCCATCGTCTTCATGCTGTTCATCTTCGGCGTGCTGGGCTATTTCCCGGACAACCGTGCAGCCTTGATCGTCG GCGCAATCTGGATTGTGCTGCTGCTCATCGCCTACGGGTTGTGGGTCAAGCCAAAGGCGCTCAACAATCCCCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCAAAGAGGCCCGAAATGAAAACGCTCTGGAAACACTGTCACATCGCAAGCATGGCGCACGGTAAATACTCGATCATCGAGAATGCCGCCATCGTGACCT CCGGAGCGCTCATCGAGTGGATCGGGCCTGAAACCGAGCTGGCCGAGCCGGAACATGACAACTGCATCGATCTGGGCGGAGCATGGGTGACGCCCGGCCT GATCGACTGTCATACGCACACAGTGTTTGGCGGCAACCGCAGCGGTGAGTTCGAACAGCGTCTCCAGGGTGTGAGCTACGCCGAGATTGCCGCAGCAGGC GGCGGTATCGCCAGCACGGTGCGCGCGACTCGTGCGGCCAGTGAAGATGAGCTGTACGCCAGCGCCGAGCGACGCTTGCGACACTTGCTCAAGGACGGCG TGACTACCGTCGAGATGAAGTCAGGTTATGGGCTGGACCTGGAAAACGAGCGCAAGATCCTGCGGGTGATCCGCCGTCTGGGCAATACCCAACCGGTCAC
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| Amino Acid Sequence |
>permease
MTSQDGLKRGLSARHIRFMALGSAIGTGLFYGSASAIQQAGPAVLLAYLIGGAAVYMVMRALGEMAVHDPVSGSFSHYATRYMGPLAGFVLGWTYAFEMI IVCLADVTAFGIYMGFWFPEVPRWIWVLGIVFLIGALNLCNVKVFGETEFWLSILKVSAIVAMIVAGFGIMIFGIGSSTSGTEIGISNLWAHGGFMPNGV TGLIASFAVVMFAFGGIEIIGITAGEAKDPQRSLPQAINAVPLRILLFYVLTLFVLMCIYPWPQIGTQGSPFVQIFDNLGIASAATILNIVVISAAVSAI NSDIFGAGRMMYGLARDGQAPASFARLSRHGVPWMTVLVMGIALLGGVLLNYLIPKDVFLLIASLATFATVWVWLMILLTQVAMRRSMNRDEAAQLKFAV PFWPYGPAAAIVFMLFIFGVLGYFPDNRAALIVGAIWIVLLLIAYGLWVKPKALNNPH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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