Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3369 (fliQ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3369
Name
fliQ
Replicon chromosome
Genomic location 3898542 - 3898811 (- strand)

Cross-References

RefSeq YP_275527.1
GI 71735616
Entrez 3557963
INSDC AAZ35380.1
NCBI Locus Tag PSPPH_3369
UniParc UPI00000089F0
UniProtKB Acc Q48GF6
UniProtKB ID Q48GF6_PSE14
UniRef100 UniRef100_A0A038GAJ5
UniRef50 UniRef50_D4ZIB5
UniRef90 UniRef90_W0HCA8

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthesis protein FliQ
Synonyms
Evidence for Translation
Charge (pH 7) -2.05
Kyte-Doolittle Hydrophobicity Value 1.311
Molecular Weight (kDa) 9.9
Isoelectric Point (pI) 4.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6S3R PROTEIN TRANSPORT 06/25/19 Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi. Pseudomonas savastanoi pv. phaseolicola; Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) 3.5 ELECTRON MICROSCOPY 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 311 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001364 (537 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3369
Search term: fliQ

Human Homologs

References

No references are associated with this feature.