Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3369 (fliQ)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GACGGGCATGGCGCTGTTTCTGACCATGTTCATCATGGCGCCGGTTTTCGACCGCGTGAATCAGGATGCGCTGCAGCCTTATCTGGCTGAAAAGCTCAGT GCACAGGATGCAGTCGCCAAGGCGCAGGTGCCGATCAAGGATTTCATGCTGGCGCAAACCCGTACCAGTGACCTTGAGCTGTTCATGCGCCTGTCCAAGC GTACCGACATCCCCACCCCGGATGCCGCGCCGCTGACCATTCTGGTTCCAGCGTTCGTGATTTCGGAGCTCAAGACGGCGTTTCAGATCGGCTTCATGAT CTTCATTCCGTTTCTGATCATCGATCTGGTGGTGGCCAGTGTGTTGATGGCGATGGGTATGATGATGCTGTCGCCGCTGATCATTTCGCTGCCGTTCAAG ATCATGCTGTTCGTGCTGGTGGATGGCTGGGCGCTGATCGTCGGCACCCTGGCTGGCAGTTTTGGTGGCGTATGAGCCGTTTCACTGAGGAGTCTGCCCG
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| DNA Sequence for Gene |
>PSPPH_3369
|fliQ
ATGACGCCGGAAGTAGCTGTGGATCTGTTTCGCGAGGCGCTGTGGCTGACCACCGTGCTGGTCGCGATTCTTGTGGTGCCGAGCCTGTTGTGCGGTCTGC TGGTGGCGATGTTTCAGGCGGCCACGCAGATCAACGAACAGACCCTGAGCTTCCTGCCGCGCCTGTTGGTCATGCTCGTGACGCTGATTGTCATCGGCCC CTGGCTGCTGAAAATTTTCATGGAATACATGCTGTCGTTGTACACCAGTATTCCGACGCTGATCGGCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCGCATGCAGCCGATGCTTGCGCTGACCGATATCCAGATCAGTACCTGGGTAGCGAGCTTCATGCTGCCGATGTTTCGTATCGTCGCGTTGCTGATGA CCATGCCGGTGATTGGCACCACGCTGGTTCCCCGACGCGTGCGTCTTTACCTCGCATTTGCCATCACTGTGGTGGTCGCTCCAGCGCTGCCAGCCATGCC GCCGGTTCAGGCGCTTGACCTCAGTGGGCTGTTGCTGATCGGCGAGCAGATCATCATCGGTGCCGGCATGGGGCTGTCCCTGCAGATGTTTTTCCATATC TTCGTGATCGCCGGGCAGATCATCTCGACGCAGATGGGCATGGGCTTTGCCTCGATGGTCGACCCTACCAACGGCGTATCTTCGGCTGTTATCGGCCAGT TTTTTACCATGCTGGTCACGCTGTTGTTCTTGTTCATGAACGGCCATCTGGTGGTGTTGGAAGTACTTGTCGAAAGCTTCACCACGATGCCGGTGGGTGG
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| Amino Acid Sequence |
>flagellar biosynthesis protein FliQ
MTPEVAVDLFREALWLTTVLVAILVVPSLLCGLLVAMFQAATQINEQTLSFLPRLLVMLVTLIVIGPWLLKIFMEYMLSLYTSIPTLIG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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