Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3072 (tliF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas savastanoi pv. phaseolicola 1448A
GCF_000012205.1|latest
Locus Tag
PSPPH_3072
Name
tliF
Replicon chromosome
Genomic location 3568941 - 3570290 (- strand)

Cross-References

RefSeq YP_275246.1
GI 71735798
Entrez 3558153
INSDC AAZ35562.1
NCBI Locus Tag PSPPH_3072
UniParc UPI0000575AE6
UniProtKB Acc Q48H87
UniProtKB ID Q48H87_PSE14
UniRef100 UniRef100_Q48H87
UniRef50 UniRef50_Q4K5P1
UniRef90 UniRef90_Q87ZU6

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7) -0.33
Kyte-Doolittle Hydrophobicity Value -0.454
Molecular Weight (kDa) 50.2
Isoelectric Point (pI) 6.90

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 253 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001200 (760 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPPH_3072
Search term: tliF

Human Homologs

References

No references are associated with this feature.