Pseudomonas savastanoi pv. phaseolicola 1448A, PSPPH_3072 (tliF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Sequence Data

Strain Pseudomonas syringae pv. phaseolicola 1448A chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
CCTTGAGCAACAACTGGCTTCGGCAGGTTTCAGTCTGCAGCACAGTGCAATTCTTGCCCCTGCTGATGGCATAGCCGTCAACCTGGGCGTGCACACCGAA GGCGCAGTGGTGCGTGCCGGTGAAACCCTGCTGGAAATCGTACCGCAGGGCACACGGCTTGAAGTCGAAGGGCGTCTGCCGGTGCAGTTGATCGACAAGG TTGCCAGCCATTTGCCGGTCGATATCCTCTTCACTGCGTTCAATCAAAGTCGCACGCCGCGGGTTTCCGGTGAGGTAAACCTGATTTCTGCCGATCAGAT GCAGGATGAGAAAACCGGCCAGCCCTATTACGTGCTGCGCACTTCGGTGGGCGATGCAGTACTGGAAAAACTCAACGGGTTGGTGATCAAGCCGGGCATG CCCGCTGAAATGTTTGTGCGCACGGGTGAACGCTCGCTGCTCAATTATCTGTTCAAACCTTTGCTGGACCGTGCCGGCTCCGCGTTGACGGAGGAATAGG
DNA Sequence for Gene
>PSPPH_3072 |tliF
ATGTCTCGTCATCCCCTGAAAGCCGCTTTGCTGACGGCCATCCTGCTGGGCACTGCTTCATTGAGTCATGCGATGGGCCCGTTTCAGGTCTATGAGCTGG CGCTTCGCAACGACCCGACTTACCTGGGCGCGCTCAAGGAGCGCGATGCGGGCCTGGAAAACCGGGTGATTGGTCGTGCAGGCTTGTTGCCGCGTGTTTC ATACAGCTACAACAAAGGACGCAACGACTCCAAGGCCACCCTCAAAGGCGGCCGTGAAGACACCACTGACCATCGCCACTACAACAGCTTTGGTTCAAGC CTGACGATTCAGCAGCCGCTGATCGATTACGAGGCCTACGCCAATTACCGCAAAGGCCTGGCTCAGGCGTTGTTTGCCGACGAGACCTTTCGCAGCAAGA GTCAGGAATTGCTGGTGCGGGTTCTGACCCTTTATACCCAGGCACTGTTCGCGCAGGACCAGATCAATATAGCCCGCGCCAAACAGCAGGCGTTCGAACG CCAGTTTGCACAGAACCGGCAAATGTTCCAGCAAGGCGAGGGTACCCGCACCGACATTCTTGAAGCGGAATCGCGCAACGAGCTGGCGATTGCCGAGCAG ATAGAAGCCAGCGACGAGCAGGACGCGGCCTTGCGCGAACTGGCCGCGTTGCTGGGCGAGTCGAGTATCGATGTTGCGCAGTTGGAGCCGTTGAGGGACA GTTTTCAGGCGCTGGTGCTGGTACCGTCCAGCTTTACCGAGTGGCATGCGCTGGCCATGGCCAACAGCCCGATCCTGGCCTCGCAACGCCAGTCGCTGGA AGTGGCGCGATACGAGGTGGAGCGCAACCGCGCCGGGCATCTGCCGACGGTGAATGCTTACGCGAGTATCCGTCAGAACGAATCGGACAGCGGCAACACC TACAATCAGCGTTACGACACCAACACGATAGGTATCGAGCTCAGTCTGCCGCTGTACGCCGGAGGCGGCACCAGCGCCTCGGTGCGTCAGGCCAACAGCA AGCGCGAGCAGGCGGAATACGAGCTGGAGGGCAAGACCCGCGAAACCCTGATCGAGCTGCGTCGTCAGTTCAACGCCTGTGCGTCAGGGGTGAGCAAGTT GCGCGCTTATCAGAAAGCACTGGTCTCGGCGCAGGCACTGGTCGAGTCGACACGTCAGAGTATTCTCGGCGGCGAGCGCATCAGCCTGGACGCACTCAAC GCCGAACAGCAGCTCTACAGCACCCGGCGTGATCTGGCGAAAGCCCGTTACGATTACTTGATGGCCTGGATCAAACTGCATTACTACGCCGGTACGTTGC GCGACACCGATCTGGCGCGTATTGACGAGGCCTTCGTTGTGGCGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTGTCGTTGGTCAGTTCTGCGCCGTGAAACGCGCCAGCGAGAAGGCTGAAAGGTCTACATCGCTGGTGCCGTGAATACAGCGTTGCGCAAGGGCCAGCCC GAGCCCGGCTGAGTGTTTGAAGCCGTGACCGGAGCAGGCCGAAACCACTGTCACGTTCTTCAGATGGGGGTGTTCATCGATGATGAAGTGGCAGTCCGGC GTGACGGTGTAGGCGCAGACCGAAGACTTGACCACGTTCGGCGTCAGTCCCGCAATCTTGCCCTGCACCTGGGTCTGGAACATTTCCTGCTCCTCCCTTG CCGTAACAGTGCGGTCCAGCTGGTCGGCAGCGGATGCTTCAATGTATTGCTCGGTGGCGACCTTCATACTGTTTTCACCGGGCAGGGGCGGGAAGCCATA GTTGACATCATCCTCCCCGGGCCCGTGAGTCAGAATGAAGCTCGGCGAACGTGGTGCAAAAGCGGCATTCTCCTGCAATTCGAACCAGAACAGCTTTTGC
Amino Acid Sequence
>ABC transporter permease
MSRHPLKAALLTAILLGTASLSHAMGPFQVYELALRNDPTYLGALKERDAGLENRVIGRAGLLPRVSYSYNKGRNDSKATLKGGREDTTDHRHYNSFGSS LTIQQPLIDYEAYANYRKGLAQALFADETFRSKSQELLVRVLTLYTQALFAQDQINIARAKQQAFERQFAQNRQMFQQGEGTRTDILEAESRNELAIAEQ IEASDEQDAALRELAALLGESSIDVAQLEPLRDSFQALVLVPSSFTEWHALAMANSPILASQRQSLEVARYEVERNRAGHLPTVNAYASIRQNESDSGNT YNQRYDTNTIGIELSLPLYAGGGTSASVRQANSKREQAEYELEGKTRETLIELRRQFNACASGVSKLRAYQKALVSAQALVESTRQSILGGERISLDALN AEQQLYSTRRDLAKARYDYLMAWIKLHYYAGTLRDTDLARIDEAFVVAR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site