Pseudomonas syringae pv. tomato DC3000, PSPTO_4562

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4562
NCBI Old Locus Tag	PSPTO4562
Name	Synonym: PSPTO4562
Replicon	chromosome
Genomic location	5156274 - 5157284 (+ strand)

Cross-References

RefSeq	NP_794315.1
GI	28871696
Entrez	1186245
INSDC	AAO58010.1
NCBI Locus Tag	PSPTO_4562
NCBI Old Locus Tag	PSPTO4562
UniParc	UPI0000009376
UniProtKB Acc	Q87WI4
UniProtKB ID	Q87WI4_PSESM
UniRef100	UniRef100_Q87WI4
UniRef50	UniRef50_P0AEG0
UniRef90	UniRef90_G8Q990

Product

Feature Type	CDS
Coding Frame	1
Product Name	dipeptide ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7)	2.40
Kyte-Doolittle Hydrophobicity Value	0.721
Molecular Weight (kDa)	36.9
Isoelectric Point (pI)	8.44

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004090 (513 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4562 Search term: dipeptide ABC transporter permease

Human Homologs

References