Pseudomonas syringae pv. tomato DC3000, PSPTO_4562

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0055085	transmembrane transport	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00528	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00528	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pst02010	ABC transporters	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00528	Binding-protein-dependent transport system inner membrane component	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	114	333	9.8E-47
PANTHER	PTHR43163	DIPEPTIDE TRANSPORT SYSTEM PERMEASE PROTEIN DPPB-RELATED	-	-	1	335	3.2E-126
Gene3D	G3DSA:1.10.3720.10	-	IPR035906	MetI-like superfamily	87	325	1.3E-21
SUPERFAMILY	SSF161098	MetI-like	IPR035906	MetI-like superfamily	89	319	9.97E-19
CDD	cd06261	TM_PBP2	IPR000515	ABC transporter type 1, transmembrane domain MetI-like	96	316	1.51055E-20
Pfam	PF19300	Binding-prot-dependent transport system membrane comp, N-term	IPR045621	ABC transporter type 1, GsiC-like, N-terminal domain	1	102	3.8E-10

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.