Pseudomonas syringae pv. tomato DC3000, PSPTO_4151

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_4151
NCBI Old Locus Tag	PSPTO4151
Name	Synonym: PSPTO4151
Replicon	chromosome
Genomic location	4677998 - 4678624 (- strand)

Cross-References

RefSeq	NP_793912.1
GI	28871293
Entrez	1185831
INSDC	AAO57607.1
NCBI Locus Tag	PSPTO_4151
NCBI Old Locus Tag	PSPTO4151
UniParc	UPI00000091EF
UniProtKB Acc	Q87XM6
UniProtKB ID	Q87XM6_PSESM
UniRef100	UniRef100_Q4ZPK2
UniRef50	UniRef50_Q4K750
UniRef90	UniRef90_Q48LU1

Product

Feature Type	CDS
Coding Frame	1
Product Name	LuxR family DNA-binding response regulator
Synonyms
Evidence for Translation
Charge (pH 7)	1.37
Kyte-Doolittle Hydrophobicity Value	0.103
Molecular Weight (kDa)	23.0
Isoelectric Point (pI)	7.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 620 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000034 (777 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_4151 Search term: LuxR family DNA-binding response regulator

Human Homologs

References