Pseudomonas syringae pv. tomato DC3000, PSPTO_4151
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas syringae pv. tomato str. DC3000 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGGCGTCGCATGCCCCTTGCAGGCGTGCGGTCAGGCTGAGGAGGCGCGAAGGCGGCAGCGCTTCTCGGTTTGTCGTCAGTGGTGTGCTCCAGGCAATGA CCTGGCAAGTTTTATGTATTGCGTTGCTGGCGATAAGCCATGCATCGATCGTTATGCGCGCTGATATAGCGACAGTCTGGCGATGCTTTTAACAGATCCA GCGCGATTTTTTCGGAACATGAAAAGTTCGGTCTGGTCTCGCTGAATCATTTATCTACTGGCGCAGCTGTGCCTACAGGCGCGCGCCCAGCAGCAATAAT TCACCAGGTTCCCAAAAGGAAGGCTCTGTGAAAATTAATAAAAAATGCACTTTATTGCCAAGTTTTGTAGGAAGTTTCTGCTGTAATTGTAGGAAAGGTC TCTGGCTGCAACTCCACAAGAGTGAGCGCCATGCAAAGCAGTAAACGACTAAGTTATTGTGCTGGCTCTGAAAATTCGAATAGCGAAAAATGGACTGCCC
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| DNA Sequence for Gene |
>PSPTO_4151
ATGAATAAAGTGCTGATCGTGGATGATCATCCCGTCATTCGCCTTGCTGTGCGCATGCTGATGGAGCGTCATGGCTATGAGGTCATCGCGGAGACTGACA ACGGTGTGGATGCGCTGCAACTGGCACGTGAGCACCTTCCGGACATCGTCATCCTTGACATTGGTATACCCAAGCTAGACGGGCTGGAGGTTATCGCTCG TCTGTCAGCCATGACATTGCCGTTCAAGGTGCTGATTCTGACGTCTCAGGCACCCGGCCACTTCTCGATGCGTTGCATGCAGGCAGGCGCTGCCGGGTAT GTCTGCAAGCAACAGGATCTGACCGAACTGCTCAGTGCTATCAAGGCTGTGCTGTCAGGGTACAGCTACTTTCCCAATCAGGCATTGCACACGGTTCGTT CCAGTATGGGGAACGCGAGCGAATCGGACATGGTTGACCGTCTTTCCGGCAGGGAAATGATGGTTCTGCAGCAACTGGCCAGAGGTAAAACCAACAAGGA AATTGCAGACGGCATGTTTTTGAGCAACAAGACGGTCAGTACCTATAAAACGCGTTTATTGCTCAAGCTCAATGCGCATTCGCTGGTCGATCTGATCGAG CTTGCCCAGCGCAACGGGCTTGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGCAGGTCTGGCCCTGAGATCCAGGCGTGCTTGCCAGACGGCGAGCCGCCGCCCCCCCTGTAACGAGCCTGTTTTTTGCGAGAGGCGAGCAGGCTTGTTC TTCGATTGCTTACACGTCGAAATCGTAATCTGCCAACTGCTTTTGCAGGCGCCGTTCTTCAAGCAGATTGTCGATGGTGCGTCGCTTGCTCAGGTTGGTC TTGGCCGGTTCGATGGCCGGGGGGTCGGCTTCATCGGTGTCAGCGACGACAAGGTCATCATCTATGTCCAGTTGCTGATTGTCAGCACTCATAAAGTTGA CTCCAGGGCTGTGACTCTCTGGCGCCTCTTATATAGGCAAACTACCGGCGGGTAAAAAAGATTTTTTCAATCGATGAGACAGCAACCACCTTGCTGCCTC AATCGTCGGAAGTCTTGTCTTTGAAATCACACAGGTCTTCGATGCGGCAACTGCCGCAGCGGGGCTTGCGCGCCTGGCAAACGTAGCGTCCATGTAAAAT
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| Amino Acid Sequence |
>LuxR family DNA-binding response regulator
MNKVLIVDDHPVIRLAVRMLMERHGYEVIAETDNGVDALQLAREHLPDIVILDIGIPKLDGLEVIARLSAMTLPFKVLILTSQAPGHFSMRCMQAGAAGY VCKQQDLTELLSAIKAVLSGYSYFPNQALHTVRSSMGNASESDMVDRLSGREMMVLQQLARGKTNKEIADGMFLSNKTVSTYKTRLLLKLNAHSLVDLIE LAQRNGLV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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