Pseudomonas syringae pv. tomato DC3000, PSPTO_2003 (ccoO)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_2003
NCBI Old Locus Tag	PSPTO2003
Name	ccoO Synonym: PSPTO2003
Replicon	chromosome
Genomic location	2185907 - 2186515 (- strand)

Cross-References

RefSeq	NP_791826.1
GI	28869207
Entrez	1183648
INSDC	AAO55521.1
NCBI Locus Tag	PSPTO_2003
NCBI Old Locus Tag	PSPTO2003
UniParc	UPI0000008A0E
UniProtKB Acc	Q884T3
UniProtKB ID	Q884T3_PSESM
UniRef100	UniRef100_Q884T3
UniRef50	UniRef50_Q4KFE4
UniRef90	UniRef90_Q48GI7

Product

Feature Type	CDS
Coding Frame	1
Product Name	cbb3-type cytochrome c oxidase subunit II
Synonyms
Evidence for Translation
Charge (pH 7)	3.61
Kyte-Doolittle Hydrophobicity Value	-0.126
Molecular Weight (kDa)	22.2
Isoelectric Point (pI)	8.68

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003806 (921 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_2003 Search term: ccoO Search term: cbb3-type cytochrome c oxidase subunit II

Human Homologs

References