Pseudomonas syringae pv. tomato DC3000, PSPTO_2003 (ccoO)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.760.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pst01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pst02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 15 195 9.64E-28
Gene3D G3DSA:6.10.250.2250 - - - 1 39 5.6E-19
FunFam G3DSA:1.10.760.10:FF:000003 Cbb3-type cytochrome c oxidase subunit II - - 40 202 4.7E-90
Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO IPR003468 Cytochrome c oxidase, monohaem subunit/FixO 3 178 4.0E-76
NCBIfam TIGR00781 JCVI: cytochrome-c oxidase, cbb3-type subunit II IPR003468 Cytochrome c oxidase, monohaem subunit/FixO 3 179 6.3E-79
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 40 202 1.6E-62

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.