Pseudomonas syringae pv. tomato DC3000, PSPTO_1739

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_1739
NCBI Old Locus TagPSPTO1739
Name
Synonym: PSPTO1739
Replicon chromosome
Genomic location 1907254 - 1908180 (- strand)

Cross-References

RefSeq NP_791564.1
GI 28868945
Entrez 1183376
INSDC AAO55259.1
NCBI Locus Tag PSPTO_1739
NCBI Old Locus Tag PSPTO1739
UniParc UPI0000008909
UniProtKB Acc Q885U2
UniProtKB ID Q885U2_PSESM
UniRef100 UniRef100_Q885U2
UniRef50 UniRef50_A0A0B7DFS8
UniRef90 UniRef90_D7I2Q1

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) -1.92
Kyte-Doolittle Hydrophobicity Value -0.216
Molecular Weight (kDa) 34.7
Isoelectric Point (pI) 6.61

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 455 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000167 (2758 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_1739

Human Homologs

References

No references are associated with this feature.