Pseudomonas syringae pv. tomato DC3000, PSPTO_1739
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR45138 | REGULATORY COMPONENTS OF SENSORY TRANSDUCTION SYSTEM | - | - | 84 | 307 | 6.6E-65 |
| NCBIfam | TIGR00254 | JCVI: diguanylate cyclase (GGDEF) domain | IPR000160 | GGDEF domain | 145 | 307 | 2.5E-49 |
| CDD | cd01949 | GGDEF | IPR000160 | GGDEF domain | 148 | 303 | 4.08992E-63 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 152 | 306 | 1.33E-46 |
| Gene3D | G3DSA:3.30.70.270 | - | IPR043128 | Reverse transcriptase/Diguanylate cyclase domain | 140 | 307 | 8.8E-55 |
| Pfam | PF00990 | Diguanylate cyclase, GGDEF domain | IPR000160 | GGDEF domain | 147 | 303 | 1.1E-45 |
| SMART | SM00267 | duf1_3 | IPR000160 | GGDEF domain | 135 | 307 | 6.7E-58 |
| FunFam | G3DSA:3.30.70.270:FF:000001 | Diguanylate cyclase domain protein | - | - | 142 | 307 | 5.7E-52 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.