Pseudomonas syringae pv. tomato DC3000, PSPTO_1208

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_1208
NCBI Old Locus Tag	PSPTO1208
Name	Synonym: PSPTO1208
Replicon	chromosome
Genomic location	1324328 - 1325305 (- strand)

Cross-References

RefSeq	NP_791040.1
GI	28868421
Entrez	1182844
INSDC	AAO54735.1
NCBI Locus Tag	PSPTO_1208
NCBI Old Locus Tag	PSPTO1208
UniParc	UPI0000008707
UniProtKB Acc	Q887S8
UniProtKB ID	Q887S8_PSESM
UniRef100	UniRef100_Q887S8
UniRef50	UniRef50_Q887S8
UniRef90	UniRef90_Q887S8

Product

Feature Type	CDS
Coding Frame	1
Product Name	regulatory protein
Synonyms
Evidence for Translation
Charge (pH 7)	11.17
Kyte-Doolittle Hydrophobicity Value	-0.194
Molecular Weight (kDa)	35.4
Isoelectric Point (pI)	10.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 109 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000462 (1708 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_1208 Search term: regulatory protein

Human Homologs

References