Pseudomonas syringae pv. tomato DC3000, PSPTO_1208
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| PANTHER | PTHR30273 | PERIPLASMIC SIGNAL SENSOR AND SIGMA FACTOR ACTIVATOR FECR-RELATED | IPR012373 | Fe(2+)-dicitrate sensor, transmembrane component | 11 | 319 | 1.0E-41 |
| PIRSF | PIRSF018266 | FecR | IPR012373 | Fe(2+)-dicitrate sensor, transmembrane component | 9 | 324 | 3.5E-79 |
| Pfam | PF16220 | Domain of unknown function (DUF4880) | IPR032623 | FecR, N-terminal | 19 | 61 | 7.7E-10 |
| Gene3D | G3DSA:2.60.120.1440 | - | - | - | 104 | 246 | 1.3E-20 |
| Pfam | PF04773 | FecR protein | IPR006860 | FecR protein | 117 | 210 | 7.1E-14 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.