Pseudomonas syringae pv. tomato DC3000, PSPTO_0824 (pilS)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0824
NCBI Old Locus Tag	PSPTO0824
Name	pilS Synonym: PSPTO0824
Replicon	chromosome
Genomic location	890930 - 892525 (- strand)

Cross-References

RefSeq	NP_790671.1
GI	28868052
Entrez	1182449
INSDC	AAO54366.1
NCBI Locus Tag	PSPTO_0824
NCBI Old Locus Tag	PSPTO0824
UniParc	UPI00000085AA
UniProtKB Acc	Q889C6
UniProtKB ID	Q889C6_PSESM
UniRef100	UniRef100_Q889C6
UniRef50	UniRef50_P33639
UniRef90	UniRef90_Q889C6

Product

Feature Type	CDS
Coding Frame	1
Product Name	sensor protein PilS
Synonyms
Evidence for Translation
Charge (pH 7)	-0.74
Kyte-Doolittle Hydrophobicity Value	0.142
Molecular Weight (kDa)	58.3
Isoelectric Point (pI)	6.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 615 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004208 (433 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0824 Search term: pilS Search term: sensor protein PilS

Human Homologs

References