Pseudomonas syringae pv. tomato DC3000, PSPTO_0328 (ompR)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0328
NCBI Old Locus Tag	PSPTO0328
Name	ompR Synonym: PSPTO0328
Replicon	chromosome
Genomic location	358877 - 359617 (+ strand)

Cross-References

RefSeq	NP_790178.1
GI	28867559
Entrez	1181937
INSDC	AAO53873.1
NCBI Locus Tag	PSPTO_0328
NCBI Old Locus Tag	PSPTO0328
UniParc	UPI00000083C5
UniProtKB Acc	Q88AQ8
UniProtKB ID	Q88AQ8_PSESM
UniRef100	UniRef100_A0A038GH96
UniRef50	UniRef50_Q3IJP0
UniRef90	UniRef90_U5VPQ2

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA-binding response regulator OmpR
Synonyms
Evidence for Translation
Charge (pH 7)	-1.54
Kyte-Doolittle Hydrophobicity Value	-0.228
Molecular Weight (kDa)	27.3
Isoelectric Point (pI)	5.94

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 626 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004784 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0328 Search term: ompR Search term: DNA-binding response regulator OmpR

Human Homologs

References