Pseudomonas syringae pv. tomato DC3000, PSPTO_0314

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0314
NCBI Old Locus Tag	PSPTO0314
Name	Synonym: PSPTO0314
Replicon	chromosome
Genomic location	340857 - 341858 (+ strand)

Cross-References

RefSeq	NP_790164.1
GI	28867545
Entrez	1181923
INSDC	AAO53859.1
NCBI Locus Tag	PSPTO_0314
NCBI Old Locus Tag	PSPTO0314
UniParc	UPI00000083B7
UniProtKB Acc	Q88AS2
UniProtKB ID	Q88AS2_PSESM
UniRef100	UniRef100_Q88AS2
UniRef50	UniRef50_Q9HTX3
UniRef90	UniRef90_Q88AS2

Product

Feature Type	CDS
Coding Frame	1
Product Name	iron ABC transporter periplasmic iron-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-1.62
Kyte-Doolittle Hydrophobicity Value	-0.224
Molecular Weight (kDa)	36.5
Isoelectric Point (pI)	6.52

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 297 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004799 (531 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0314 Search term: iron ABC transporter periplasmic iron-binding protein

Human Homologs

References