Pseudomonas syringae pv. tomato DC3000, PSPTO_0314
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | pst02010 | ABC transporters | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 125 | 330 | 5.6E-117 |
| PIRSF | PIRSF002825 | CfbpA | IPR026045 | Ferric binding protein | 1 | 333 | 2.4E-101 |
| Pfam | PF13343 | Bacterial extracellular solute-binding protein | - | - | 72 | 298 | 1.9E-18 |
| SUPERFAMILY | SSF53850 | Periplasmic binding protein-like II | - | - | 25 | 329 | 3.66E-79 |
| Gene3D | G3DSA:3.40.190.10 | - | - | - | 28 | 296 | 5.6E-117 |
| PANTHER | PTHR30006 | THIAMINE-BINDING PERIPLASMIC PROTEIN-RELATED | - | - | 3 | 332 | 9.9E-72 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.