Pseudomonas mendocina NK-01, MDS_3800

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3800
Name
Replicon chromosome
Genomic location 4177303 - 4177773 (- strand)

Cross-References

RefSeq YP_004381583.1
GI 330504714
Entrez 10458582
INSDC AEB59831.1
NCBI Locus Tag MDS_3800
UniParc UPI000206DFC1
UniProtKB Acc F4DUV3
UniProtKB ID F4DUV3_PSEMN
UniRef100 UniRef100_F4DUV3
UniRef50 UniRef50_B2FJ68
UniRef90 UniRef90_F4DUV3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -1.80
Kyte-Doolittle Hydrophobicity Value -0.488
Molecular Weight (kDa) 18.0
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 143 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003717 (313 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3800

Human Homologs

References

No references are associated with this feature.