Strain | Pseudomonas mendocina NK-01 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GGGAATCGGTGGGCACAGGTAGCCATCGGGGATATCCCAGTGGCGGATACCGTAGTACTGCGCCAGCAACGCGCGATTGAACACCTTGACCGCTGAAGGA TTGGCGAAATCGATGCTTGGCTTGCCATATGGGTTGGTGATGACGAATTGGCCCAGCTCGGGGCTTGCCTTGATCAACGCGGGAAAATCGTAGTGCCCCT GATGACGATTGCGCGGATGCAGCTCGCCCTTGCTCGGTGCGGTCTTCATGGCTGCGGGAGCGGGCTTGCGCGGGCGTTTCGGCGGCTGGGGCATGGTGGT CATCTGGTCGGGTGAGTATGAGATTTTCCCATGCTTTGCTCGCTGACCGTAACCCGGCCTTGAAGCGTTTGATCCGTGCTCTGGTTAACGGAATTCGGAA AGTGGCCATAAAGCAGCGGGGCATGTGTTGACTCAGATCAATTGGGTGCTCGCCAGCAGTCTTAGACTGCGCCCCCTTCGATCAGCAGCAAGGAGGCACC
|
|
DNA Sequence for Gene |
>MDS_3800
ATGGCATACCTGGAATGGAGCGACGACCTCGACACAGGCATCAGGGTGATTGACGACCAGCACAGGCGCATCGTCGCGATGATCAATCAACTGGATGATG CTCAACGAACCGGCAGCAAGGCGAAGGTCGCTACGGTCATCGACGAGCTGATCGACTACACCGTCTCGCACTTCGCCTTCGAGGAGGCGATGCTCGAGGA GGCCGGCTATGTGTTCACCAAGGCGCACAAGCGCGTGCACGCACTCTTCATCAAGCGCGTGGAGGACTACCGCCAGCGCTTCACCAGCGGTGAGGATATC GCTGACGAGCTCAAGGGCCTGCTGGGACGCTGGCTGTTCAGCCATATTCGCAGTGACGACCGTAACTACGTTGAGGCTGTCAACGATAATCTGCGTCGGT TGAGTGCAGATGCCTCCGAAGGTGGATGGCTGCGCCGCGCCGGGCGGCGCTTCTTCCGTGGCGCGGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
GCGCTCTCACAGCGGGAAGATCAGCGGCACCAGCAGTACGCTGACGATCATCACCAGCAGGGTGAACGGTACGCCGATACGCACGAAGTCGCCGAAGCGG TACTGGCCGGGGCCGAGCACCAGGGTATTGACCGGCGAGGAGATTGGCGTCATGAACGCCGCCGAGGCAGCCAGTGCGACGGTCATGGCGAAAGGCAGCG GCGAGGCGCCCAGTGCCTGCGCGGTGGCGATGGCCACCGGCGCCATCAGCACCGCCGTGGCGGTGTTGGAGATGAACAGGCCAATCACTGCGGTCAGGAC GAACAGGCTGGCCAGGATCAGATGTGGCCCCGCATCACCCAGGCCGCCCACCAAGCCCTGTACCGCCAGTTCGACGCCTCCGGTCTGCTGCAGCGCCTGG GCGAAAGGCAGCATGCCGACGATGAGGATCAGCGTCGGCCAGTGAATGGCGCGGTAGGCGCTGTCCAGATCGATGCAGCGAAATGCCCCCATCAGCAGGC
|
|
Amino Acid Sequence |
>hypothetical protein
MAYLEWSDDLDTGIRVIDDQHRRIVAMINQLDDAQRTGSKAKVATVIDELIDYTVSHFAFEEAMLEEAGYVFTKAHKRVHALFIKRVEDYRQRFTSGEDI ADELKGLLGRWLFSHIRSDDRNYVEAVNDNLRRLSADASEGGWLRRAGRRFFRGAA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|