Pseudomonas mendocina NK-01, MDS_3028

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3028
Name
Replicon chromosome
Genomic location 3334633 - 3336021 (+ strand)

Cross-References

RefSeq YP_004380811.1
GI 330503942
Entrez 10457810
NCBI Locus Tag MDS_3028

Product

Feature Type CDS
Coding Frame 1
Product Name
putative adenylate/guanylate cyclase
Synonyms
Evidence for Translation
Charge (pH 7) 11.23
Kyte-Doolittle Hydrophobicity Value 0.110
Molecular Weight (kDa) 51.4
Isoelectric Point (pI) 9.26

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3R5G LYASE 03/18/11 Crystal structure of the adenylyl cyclase CyaB from P. aeruginosa Pseudomonas aeruginosa 1.5 X-RAY DIFFRACTION 91.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 251 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002398 (355 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3028

Human Homologs

Ensembl 110, assembly GRCh38.p14
guanylate cyclase 2D, retinal [Source:HGNC Symbol;Acc:HGNC:4689]
E-value: 9.4e-13
Percent Identity: 31.2

References

No references are associated with this feature.