Pseudomonas mendocina NK-01, MDS_3028

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009190	cyclic nucleotide biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00211	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0035556	intracellular signal transduction	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00211	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pmk02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pmk00230	Purine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	220	408	4.71E-62
FunFam	G3DSA:3.30.70.1230:FF:000025	Adenylate cyclase 1	-	-	218	415	1.9E-126
PANTHER	PTHR43081	ADENYLATE CYCLASE, TERMINAL-DIFFERENTIATION SPECIFIC-RELATED	-	-	210	406	3.7E-43
Pfam	PF05230	MASE2 domain	IPR007894	MASE2	18	107	2.0E-26
CDD	cd07302	CHD	IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase	227	407	1.46209E-61
Pfam	PF00211	Adenylate and Guanylate cyclase catalytic domain	IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase	224	407	8.3E-39
Coils	Coil	Coil	-	-	171	198	-
Gene3D	G3DSA:3.30.70.1230	Nucleotide cyclase	IPR029787	Nucleotide cyclase	218	415	3.0E-69
SMART	SM00044	cyc_6	IPR001054	Adenylyl cyclase class-3/4/guanylyl cyclase	187	397	1.2E-37
Coils	Coil	Coil	-	-	439	462	-

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.