Pseudomonas mendocina NK-01, MDS_2342

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_2342
Name
Replicon chromosome
Genomic location 2561698 - 2563179 (+ strand)

Cross-References

RefSeq YP_004380125.1
GI 330503256
Entrez 10457124
INSDC AEB58373.1
NCBI Locus Tag MDS_2342
UniParc UPI000206E3AB
UniProtKB Acc F4DT63
UniProtKB ID F4DT63_PSEMN
UniRef100 UniRef100_F4DT63
UniRef50 UniRef50_I7BVC0
UniRef90 UniRef90_F4DT63

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux system outer membrane lipoprotein
Synonyms
Evidence for Translation
Charge (pH 7) -10.52
Kyte-Doolittle Hydrophobicity Value -0.184
Molecular Weight (kDa) 53491.4
Isoelectric Point (pI) 4.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 323 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003040 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_2342

Human Homologs

References

No references are associated with this feature.