Pseudomonas mendocina NK-01, MDS_1956

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_1956
Name
Replicon chromosome
Genomic location 2144387 - 2145481 (+ strand)

Cross-References

RefSeq YP_004379739.1
GI 330502870
Entrez 10456738
INSDC AEB57987.1
NCBI Locus Tag MDS_1956
UniParc UPI000206D986
UniProtKB Acc F4DNP2
UniProtKB ID F4DNP2_PSEMN
UniRef100 UniRef100_F4DNP2
UniRef50 UniRef50_Q6FA94
UniRef90 UniRef90_K9NEQ8

Product

Feature Type CDS
Coding Frame 1
Product Name
prephenate dehydratase
Synonyms
Evidence for Translation
Charge (pH 7) -4.98
Kyte-Doolittle Hydrophobicity Value -0.244
Molecular Weight (kDa) 40682.2
Isoelectric Point (pI) 6.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 592 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002449 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_1956

Human Homologs

References

No references are associated with this feature.