Pseudomonas entomophila L48, PSEEN0253 (rmlB)

Gene Feature Overview

Strain	Pseudomonas entomophila L48 GCF_000026105.1|latest
Locus Tag	PSEEN0253
Name	rmlB
Replicon	chromosome
Genomic location	260098 - 261183 (- strand)

Cross-References

RefSeq	YP_606035.1
GI	104779537
EC Number	4.2.1.46
Entrez	4086221
INSDC	CAK13218.1
UniParc	UPI0000D77F75
UniProtKB Acc	Q1IGI4
UniProtKB ID	Q1IGI4_PSEE4
UniRef100	UniRef100_Q1IGI4
UniRef50	UniRef50_P27830
UniRef90	UniRef90_Q1IGI4

Product

Feature Type	CDS
Coding Frame	1
Product Name	dTDP-D-glucose-4,6-dehydratase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.27
Kyte-Doolittle Hydrophobicity Value	-0.261
Molecular Weight (kDa)	40328.0
Isoelectric Point (pI)	5.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 644 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004752 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSEEN0253 Search term: rmlB Search term: dTDP-D-glucose-4,6-dehydratase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000387019 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 3.4e-26 Percent Identity: 26.1
Ensembl 110, assembly GRCh38.p14	ENSP00000283148 UDP-glucuronate decarboxylase 1 [Source:HGNC Symbol;Acc:HGNC:17729] E-value: 3.4e-26 Percent Identity: 26.1

References