Pseudomonas entomophila L48, PSEEN0253 (rmlB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas entomophila L48 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCCGGGCGAACTGATCGCCGCCTTCCTCTGGGCCCAACTACAGGAAGCCCGGGGCATCACCGATCGGCGCCTGGCACTCTGGGACCGCTACCACGACACC CTGGCCGAGCTTGAGGCTCAGGGCCTGCTACGACGCCCGATCGTGCCCGCCGACTGCCAGCACAACGCGCACATGTACCATGTGCTGCTGGCGCCGGAGG TGGACCGCCAGGCCGTGATCAAGGCCCTGCGCGCCGAAGAGATCTACGCCGTGTTCCACTACGTGCCGCTACACTCGTCGCCAGCAGGTGAGCGCTATGG CCGCGTGCACGGTTCGATGCAGTTGACAGACAGCCTGTCCGAACGCCTGGTACGCCTGCCCTTGTGGTGCGGGCTCAAGCCTGCCCAGCAGGACCGTGTG GTCGACAGCCTCGGCCGGGCGCTGACGCGCCGTTGAACCCGGCCGACGGCGCAGCATCACGCCACACCTCATCAATCGACTAGCTGCAGGGACACAACAC
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| DNA Sequence for Gene |
>PSEEN0253
|rmlB
ATGCGCATTCTCGTCACTGGCGGCGCCGGCTTCATAGGGTCGGCGCTGGTCCGCCACCTGATCGACAACACCGAGCACGAAGTCCTCAACCTCGACAAGC TGACCTACGCAGGCAACCTGGAGTCGCTGCAAGGCATCGCCAGCAACAGCCGCTATGAGTTCGTCCAGGCCGACATCGCCGACCAGCCCACGGTCAGCGC CCTGCTGGAGCGCTTCCAGCCACAGGCCATCATGCACCTGGCCGCCGAGTCCCACGTCGACCGTTCCATCGACGGCCCGGCGGCGTTCATCCAGACCAAC ATCGTTGGCACCTATGCCCTGCTGGAGGCCACCCGTGCCTGGTGGAGCCGCCTGCCCGCCGACGCGCGCACGGCATTCCGCTTCCACCACATCTCCACCG ACGAGGTGTACGGCGACCTGCACGGCGTCGACGACCTGTTCACCGAAACCACCCCTTATGCCCCAAGCTCGCCCTATTCGGCCAGCAAGGCCGCCTCGGA CCACCTGGTCCGCGCCTGGCATCGCACCTATGGCCTGCCGGTGCTGATCACCAACTGCTCGAACAACTACGGCCCGTACCACTTCCCCGAGAAGCTGATC CCGCTGATGATCCTCAACGCCCTGGCCGGCAAGCCACTGCCCGTCTACGGCAATGGCCAGCAGGTACGCGACTGGCTGTACGTCGAAGACCACGCCCGCG CCCTGCTGACGGTGGTGACCACTGGCAAGGTTGGTGAAACCTACAACATCGGCGGCCACAACGAGCAGAAGAACCTCGACGTGGTGCACACCCTCTGCGA CCTGCTCGAAGAGCTGGCGCCTGAGTGCCGCCCGGCCGGCGTGGCCCGCTACAAAGACCTGATCACGTTCGTCCAGGACCGCCCCGGCCACGACCTGCGC TACGCCATCGACGCCAGCAAGATCGAACACGAGCTAGGCTGGAAACCGGATGAAACTTTCTTCACAGGGCTGCGCAAGACCGTCCAGTGGTACCTCGCTA ACCTAGACTGGTGCAAACACGTTCAGGATGGCAGCTACCAGGGCGAGCGTCTGGGCAACTCCGACTTCAAGGACCTGATCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CTAAAGGTATTGTCCTGGCCGGTGGATCCGGCACCCGCCTGCACCCGATCACCCTCGGTGTATCGAAGCAACTGCTGCCGATCTACGACAAACCGATGAT CTACTACCCGATCTCGGTGCTGATGCTGGCCGGGATCCGCGACATCCTGCTGATCTCGACACCCCGTGACCTGCCACAGTACCGCCAGCTGTTCGGCGAC GGCAGCCAGTTCGGTGTCAACATCAGCTACGCCGAACAGCCCTCGCCCGACGGCCTGGCCCAGGCGTTCCTGATCGGCGAGCAGTTCATTGGCGACGATT CGGTGTGCCTGATCCTCGGTGACAACATCTTCCATGGCCAAGGCTTCAGCGAGCAGTTGCAAAGGGCGGTCAATCGCCCCTCGGGCGCCACTGTGTTTGG CTACTGGGTCAAGGACCCGGAACGTTTCGGCGTGGTCGAGTACGACGCGCAGGGCCATGCGCTTTCGATCGAGGAGAAGCCCGCGCAGCCTAAGTCCAGC
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| Amino Acid Sequence |
>dTDP-D-glucose-4,6-dehydratase
MRILVTGGAGFIGSALVRHLIDNTEHEVLNLDKLTYAGNLESLQGIASNSRYEFVQADIADQPTVSALLERFQPQAIMHLAAESHVDRSIDGPAAFIQTN IVGTYALLEATRAWWSRLPADARTAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLPVLITNCSNNYGPYHFPEKLI PLMILNALAGKPLPVYGNGQQVRDWLYVEDHARALLTVVTTGKVGETYNIGGHNEQKNLDVVHTLCDLLEELAPECRPAGVARYKDLITFVQDRPGHDLR YAIDASKIEHELGWKPDETFFTGLRKTVQWYLANLDWCKHVQDGSYQGERLGNSDFKDLIA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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