Pseudomonas aeruginosa DK2, PADK2_12600

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa DK2
GCF_000271365.1|latest
Locus Tag
PADK2_12600
Name
Replicon chromosome
Genomic location 2662905 - 2664185 (+ strand)

Cross-References

RefSeq YP_006482503.1
GI 392983916
Entrez 13175357
NCBI Locus Tag PADK2_12600

Product

Feature Type CDS
Coding Frame 1
Product Name
RND efflux membrane fusion protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.25
Kyte-Doolittle Hydrophobicity Value -0.178
Molecular Weight (kDa) 45.2
Isoelectric Point (pI) 9.52

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
MuxA MuxA is a membrane fusion protein component of the efflux pump system MuxABC-OpmB in Pseudomonas aeruginosa. [PMID:19713238] ARO:3004073 protein homolog model Strict 801.6 99.77 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 433 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003039 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PADK2_12600

Human Homologs

References

No references are associated with this feature.