Pseudomonas aeruginosa PA7, PSPA7_3623

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa PA7
GCF_000017205.1|latest
Locus Tag
PSPA7_3623
Name
Replicon chromosome
Genomic location 3752966 - 3753727 (- strand)

Cross-References

RefSeq YP_001348977.1
GI 152989534
Entrez 5357068
NCBI Locus Tag PSPA7_3623

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -2.44
Kyte-Doolittle Hydrophobicity Value 0.381
Molecular Weight (kDa) 25.8
Isoelectric Point (pI) 5.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown (This protein may have multiple localization sites) Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
7DJS OXIDOREDUCTASE 11/21/20 Crystal structure of isopiperitenol dehydrogenase from Pseudomonas aeruginosa complexed with NAD Pseudomonas aeruginosa 1.7 X-RAY DIFFRACTION 94.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 652 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000180 (2633 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPA7_3623

Human Homologs

Ensembl 110, assembly GRCh38.p14
3-hydroxybutyrate dehydrogenase 2 [Source:HGNC Symbol;Acc:HGNC:32389]
E-value: 1.5e-28
Percent Identity: 35.7

References

No references are associated with this feature.