Pseudomonas aeruginosa PA7, PSPA7_3623

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Sequence Data

Strain Pseudomonas aeruginosa PA7 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
TGGAGGCCAGCACCTTGCCCACGCCGAGCGCGCGCATCACCTCGCCGATGGCCACTGGCGGGATGTAGGAGCGGGCATCGTTCATCCAGCCGCGCATCGC CGGGTCCAGCGACAGATACTCGTTGCGTACCAGGATCTGGCCGTCGCCCGGCTCGCCGAGCGGGGCCTCGACGAAACTGAAGGTGTCGCGGCCGGGCAGT CCGCTGGGACGCTGGGCCAACTGGTATTGCCGATTGATCTGGGTTTGCATGGCAGGCACTCGTGGAATGGAAAACGGATACCTAGGGTTAGTCGCCGGCA ACGGCGGCGGCAAGCGCCGAGCGGTGTGGAAATGACCGGTCATCTATGAGGGTGATTGGCGTTGCGCGGTGTCATCAATGGCCTGGATGGGCCATCCTCC AATCGCCTGATAGTGCTATGCCTGCCCTGGACCCTGGCTAGACTGGCCCGGTTCGATCCCGCCGCGGTTGGCGGGAGACGTTTTCCCCGAGGATCAGTAG
DNA Sequence for Gene
>PSPA7_3623
ATGAGCAAACTCCTTTCCGGCCAGGTCGCCCTGGTCACCGGCGGTGCCGCGGGCATCGGCCGCGCCACCGCGCTGGCCTTCGCCGACGCCGGGATCAAGG TGGTGGTCGCCGACCTGGATAGCGTCGGCGGCGAAGCCACGGTGGCGACTATCCGCCAGGCCGGCGGCGAGGCCGCTTTCATCCGCTGCGACGTCACCCG CGACGCCGAGGTCAAGGCGCTGGTCGAAGGCTGCGTGGCTGCCTACGGTCGCCTCGACTATGCCTTCAACAACGCCGGCATCGAGATCGAGCAGGGCAGG CTGGCCGACGGCAGCGAGGCCGAGTTCGACGCCATCATGGGGGTCAACGTGAAGGGCGTCTGGCTGTGCATGAAGCACCAGATCCCGCTGATGCTGGCCC AGGGCGGCGGCGCGATCGTCAACACCGCGTCGGTCGCCGGCCTCGGCGCGGCACCGAAGATGAGCATCTACGCGGCTTCCAAGCATGCGGTGATCGGCCT GACCAAGTCGGCGGCGATCGAGTACGCGAAGAAGGGCATCCGCATCAACGCCGTGTGTCCGGCGGTGATCGACACCGACATGTTCCGCCGCGCCTACGAG GCCGACCCGCGCAAGGCCGAGTTCGCTGCCGCGATGCATCCGTTGGGGCGGGTCGGGCGGGTCGAGGAGATCGCTGCCGCGGTGCTCTACCTGTGCAGCG ATAACGCCGGCTTCACCACCGGCATCGCCTTGCCGGTGGACGGCGGCGCGACGGCGATCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCCGTCCGCCTCGGATGCCTCGTCGCGGGGCGTTCGCATTCTGTTACAGGTCGGCGCGCGGTTTGGCGCGCCAGGCCACTGCCGGGGGACTAACCTGGGT CGAGAATCCGCGGCCTGAGCCCGCCTTCGTCGCATCGGAGCAATAACAATAATGACCGCCGATCCCATCCTGACGCTGTTTCTTCCCATCGCCCTGGGCA TCATCATGCTCGGCCTCGGACTGTCCCTGACCCCGGCCGACTTCATCCGCGTTGTGCGCTATCCGAAGCCGGTGCTGGTCGGCCTGGTATGCCAGATCGT CCTGCTGCCCCTGGCCTGCTTCCTGATCGTCCAGGGCTTCGCCCTGGAGGCGGCCCTGGCGGTCGGCATGATGCTGCTGGCGGCCTCGCCTGGCGGCACT ACCGCCAACCTCTACAGCCACCTGGCGCATGGCGACGTGGCGCTGAACATCACCCTGACCGCGGTGAACTCGGTGATCGCCATCCTCACCATGCCGCTGA
Amino Acid Sequence
>short chain dehydrogenase
MSKLLSGQVALVTGGAAGIGRATALAFADAGIKVVVADLDSVGGEATVATIRQAGGEAAFIRCDVTRDAEVKALVEGCVAAYGRLDYAFNNAGIEIEQGR LADGSEAEFDAIMGVNVKGVWLCMKHQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRINAVCPAVIDTDMFRRAYE ADPRKAEFAAAMHPLGRVGRVEEIAAAVLYLCSDNAGFTTGIALPVDGGATAI
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site