Pseudomonas lutea DSM 17257, LT42_RS20285

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas lutea DSM 17257
GCF_000759445.1|latest
Locus Tag
LT42_RS20285
NCBI Old Locus TagLT42_20890
Name
Synonym: LT42_20890
Replicon Contig002
Genomic location 1821292 - 1822395 (+ strand)

Cross-References

RefSeq WP_037016947.1
GI 739152575
EC Number 2.7.7.7
INSDC KGF64326.1
NCBI Locus Tag LT42_RS20285
NCBI Old Locus Tag LT42_20890
UniParc UPI0005141118
UniProtKB Acc A0A098SWS8
UniProtKB ID A0A098SWS8_9PSED
UniRef100 UniRef100_A0A098SWS8
UniRef50 UniRef50_P0A990
UniRef90 UniRef90_Q1IH47

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase III subunit beta
Synonyms
Evidence for Translation
Charge (pH 7) -9.84
Kyte-Doolittle Hydrophobicity Value -0.103
Molecular Weight (kDa) 40.6
Isoelectric Point (pI) 4.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Drugs Targeting this Protein

Identified by Diamond using e-value cutoff of 0.0001 and returning alignments that span 100% of the query sequence and that have more than 95% identity.

Drug Name Source Accession Source DB Version Target Accession Target Description Percent Identity Alignment Length E-Value
[(5R)-5-(2,3-dibromo-5-ethoxy-4-hydroxybenzyl)-4-oxo-2-thioxo-1,3-thiazolidin-3-yl]acetic acid DB06998 DrugBank 5.1.4 P0A988 DNA polymerase III subunit beta 56.1 367 4.2e-112

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000002 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: LT42_RS20285

Human Homologs

References

No references are associated with this feature.