Pseudomonas lutea DSM 17257, LT42_RS15945

Gene Feature Overview

Strain	Pseudomonas lutea DSM 17257 GCF_000759445.1|latest
Locus Tag	LT42_RS15945
NCBI Old Locus Tag	LT42_16435
Name	Synonym: LT42_16435
Replicon	Contig002
Genomic location	838958 - 840421 (+ strand)

Cross-References

RefSeq	WP_037014935.1
GI	739150449
INSDC	KGF63504.1
NCBI Locus Tag	LT42_RS15945
NCBI Old Locus Tag	LT42_16435
UniParc	UPI0005130E46
UniProtKB Acc	A0A098SUW6
UniProtKB ID	A0A098SUW6_9PSED
UniRef100	UniRef100_A0A098SUW6
UniRef50	UniRef50_A6V0P4
UniRef90	UniRef90_A0A098SUW6

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent RNA helicase RhlB
Synonyms
Evidence for Translation
Charge (pH 7)	-5.93
Kyte-Doolittle Hydrophobicity Value	-0.239
Molecular Weight (kDa)	54.0
Isoelectric Point (pI)	6.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001808 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: LT42_RS15945 Search term: ATP-dependent RNA helicase RhlB

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000382840 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000496663 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000494518 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000392494 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000486443 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000487062 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000486306 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000486516 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000496052 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000496222 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000493819 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000478443 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000487224 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000496524 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000495377 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000494040 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000493475 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000486720 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2
Ensembl 110, assembly GRCh38.p14	ENSP00000486514 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 1.7e-65 Percent Identity: 39.2

References