Pseudomonas lutea DSM 17257, LT42_RS14280

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas lutea DSM 17257
GCF_000759445.1|latest
Locus Tag
LT42_RS14280
NCBI Old Locus TagLT42_14730
Name
Synonym: LT42_14730
Replicon Contig002
Genomic location 471712 - 472770 (- strand)

Cross-References

RefSeq WP_037014125.1
GI 739149599
INSDC KGF63188.1
NCBI Locus Tag LT42_RS14280
NCBI Old Locus Tag LT42_14730
UniParc UPI00051309B9
UniProtKB Acc A0A098SWY0
UniProtKB ID A0A098SWY0_9PSED
UniRef100 UniRef100_A0A098SWY0
UniRef50 UniRef50_Q6D1H8
UniRef90 UniRef90_A0A098SWY0

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA polymerase IV
Synonyms
Evidence for Translation
Charge (pH 7) 3.20
Kyte-Doolittle Hydrophobicity Value -0.252
Molecular Weight (kDa) 39.3
Isoelectric Point (pI) 7.83

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000889 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: LT42_RS14280
Search term: DNA polymerase IV

Human Homologs

Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 3.0e-43
Percent Identity: 33.7
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 3.0e-43
Percent Identity: 33.7
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 3.0e-43
Percent Identity: 33.7
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 3.0e-43
Percent Identity: 33.7
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 3.0e-43
Percent Identity: 33.7
Ensembl 110, assembly GRCh38.p14
DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183]
E-value: 3.0e-43
Percent Identity: 33.7

References

No references are associated with this feature.