Pseudomonas lutea DSM 17257, LT42_RS03880

Gene Feature Overview

Strain	Pseudomonas lutea DSM 17257 GCF_000759445.1|latest
Locus Tag	LT42_RS03880
NCBI Old Locus Tag	LT42_04010
Name	Synonym: LT42_04010
Replicon	Contig001
Genomic location	935580 - 936863 (+ strand)

Cross-References

RefSeq	WP_037012908.1
GI	739148316
INSDC	KGF65130.1
NCBI Locus Tag	LT42_RS03880
NCBI Old Locus Tag	LT42_04010
UniParc	UPI0005140959
UniProtKB Acc	A0A098SY05
UniProtKB ID	A0A098SY05_9PSED
UniRef100	UniRef100_A0A098SY05
UniRef50	UniRef50_C3KN98
UniRef90	UniRef90_A0A098SY05

Product

Feature Type	CDS
Coding Frame	1
Product Name	type II and III secretion system protein RhcC2
Synonyms
Evidence for Translation
Charge (pH 7)	-1.03
Kyte-Doolittle Hydrophobicity Value	0.177
Molecular Weight (kDa)	44.2
Isoelectric Point (pI)	5.53

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003905 (448 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: LT42_RS03880 Search term: type II and III secretion system protein RhcC2

Human Homologs

References