Pseudomonas aeruginosa UCBPP-PA14, PA14_42220

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_42220
Name
Replicon chromosome
Genomic location 3764042 - 3766099 (+ strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 3 transposon mutants in orthologs

Cross-References

RefSeq YP_791518.1
GI 116049677
Entrez 4380363
INSDC ABJ10913.1
NCBI Locus Tag PA14_42220
UniParc UPI000045D1C3
UniProtKB Acc Q02KL8
UniProtKB ID Q02KL8_PSEAB
UniRef100 UniRef100_S0IUG7
UniRef50 UniRef50_Q9I310
UniRef90 UniRef90_Q9I310

Product

Feature Type CDS
Coding Frame 1
Product Name
membrane sensor domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -8.59
Kyte-Doolittle Hydrophobicity Value 0.398
Molecular Weight (kDa) 74.4
Isoelectric Point (pI) 6.20

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5M1T SIGNALING PROTEIN 10/10/16 PaMucR Phosphodiesterase, c-di-GMP complex Pseudomonas aeruginosa 2.27 X-RAY DIFFRACTION 98.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 458 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003662 (487 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_42220

Human Homologs

References

No references are associated with this feature.