Pseudomonas nitroreducens Aramco J, QX33_RS00235
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas nitroreducens Aramco J
GCF_000807755.1|latest |
| Locus Tag |
QX33_RS00235
|
| Name |
|
| Replicon | contig1 |
| Genomic location | 37582 - 38220 (+ strand) |
Cross-References
| RefSeq | WP_024763281.1 |
| GI | 639924278 |
| NCBI Locus Tag | QX33_RS00235 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
Clp protease ClpP
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -3.42 |
| Kyte-Doolittle Hydrophobicity Value | -0.053 |
| Molecular Weight (kDa) | 23.3 |
| Isoelectric Point (pI) | 6.14 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 7M1M | HYDROLASE | 03/13/21 | Crystal structure of Pseudomonas aeruginosa ClpP1 | Pseudomonas aeruginosa | 2.6 | X-RAY DIFFRACTION | 94.4 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003596 (535 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: QX33_RS00235
Search term: Clp protease ClpP
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084]
E-value:
3.1e-59
Percent Identity:
56.8
|
References
No references are associated with this feature.