Pseudomonas nitroreducens Aramco J, QX33_RS00235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas nitroreducens strain Aramco J contig1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TTCCGAAGGCCCTGATCGGCAACGAAGTCAACCGTCTGCGCGTGCAGGCTGTCCAGCAGTTCGGTGGCAACATCAAGCCTGACCAACTGCCGGCTGAGCT GTTCGAAGAGCAAGCCAAGCGCCGCGTCGTGCTGGGCCTGATCGTCGCCGAGCTGGTCAAGCAGCACGAGCTGAAGGCCGATGAAGCCCGCGTTCGCGAA ATGATCGAAGAAATGGCTTCGGCTTACCAGGAGCCGGAACAAGTTGTTGCCTGGTACTACAAGAACGACCAGCAACTGAACGAAGTCCGTTCGGTTGTAC TGGAAGAACAAGTTGTAGATACTGTCCTGCAGAAGGCCAATGTGACCGACAAGCAGGTATCCTACGAAGACGCGGTCAAGCCTGCAGAAGCTCCGCAAGC GGCCTGATCCAGCGCTTCGTTCGATTGTCACAAGCCAGCCTTCGGGCTGGCTTGTGCGTCTATAGAGACATGACTTTTTATTAGGGAGTGATCGTCGGAC
DNA Sequence for Gene
>QX33_RS00235
ATGCATAATCCTTATATGCCGCAAGTTCCGAACATTCAGGCCGCTGGTGGTCTGGTGCCGATGGTGGTGGAGCAGTCCGCCCGCGGTGAGCGTTCCTACG ACATCTATTCGCGCCTGCTGAAGGAGCGGATCATCTTCCTGGTCGGCCAGGTCGAGGACTACATGGCCAACCTCGTGGTGGCCCAGTTGCTGTTCCTCGA GGCCGAGAACCCGGACAAGGACATCCACCTCTACATCAACTCTCCGGGCGGCTCCGTGACTGCTGGCATGTCGATCTACGACACCATGCAGTTCATCAAG CCCGACGTGTCCACCATCTGTGTGGGCCAGGCGTGCAGCATGGGCGCCCTGTTGCTGGCTGGCGGCGCCGCTGGCAAGCGCTACTGCCTGCCGCATTCGC GGATGATGATCCACCAGCCGCTGGGCGGCTTCCAGGGCCAGGCCTCGGACATCGAGATCCATGCCAAGGAAATCCTCTTCATCAAGGAGCGCCTGAACCA GGTGCTGGCGCATCACACCGGCCAGCCGCTGGATGTCATCGCCCGCGACACCGACCGTGACCGCTTCATGAGTGGTGACGATGCTGTCAAGTACGGTCTG ATCGATCAGGTCTTCACTCAGCGTCCTTCTGCCGCCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GTCTCTCCGCTGTACTGCGGCCGGTAATCCGGCCGCTCGCGGGCTTGAAAATGCCTGCGAATGCCTTCATCTTGTCCTTCACGTATATCCCCGATTGGAA CGATCGAATGACTGACACCCGCAACGGCGAGGACAACGGCAAGCTGCTGTATTGCTCCTTCTGCGGCAAGAGCCAGCACGAAGTGCGCAAGTTGATTGCC GGCCCCTCGGTCTTTATCTGCGACGAGTGCGTCGACCTGTGCAATGACATCATCCGCGAGGAGGTGCAGGAAGCACAGGCAGAGAGCAGTGCGCACAAGC TTCCGGCGCCGAAAGAGATCCGCACCATCCTCGATCAGTACGTGATCGGCCAGGAACGTGCCAAGAAAACCCTGGCAGTAGCGGTGTACAACCACTACAA GCGCCTGAATCAGCGCGAGCGCAAGGACGACGTCGAGCTGGGCAAGAGCAACATCCTGCTCATCGGTCCGACGGGCTCGGGCAAGACCCTGCTCGCCGAG
Amino Acid Sequence
>Clp protease ClpP
MHNPYMPQVPNIQAAGGLVPMVVEQSARGERSYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIK PDVSTICVGQACSMGALLLAGGAAGKRYCLPHSRMMIHQPLGGFQGQASDIEIHAKEILFIKERLNQVLAHHTGQPLDVIARDTDRDRFMSGDDAVKYGL IDQVFTQRPSAA
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site