Pseudomonas simiae WCS417, PS417_RS06210

Gene Feature Overview

Strain	Pseudomonas simiae WCS417 GCF_000698265.1|latest
Locus Tag	PS417_RS06210
NCBI Old Locus Tag	PS417_22175
Name	Synonym: PS417_22175
Replicon	chromosome
Genomic location	4803743 - 4804342 (+ strand)

Cross-References

RefSeq	WP_038453713.1
GI	740668423
INSDC	AIB38239.1
NCBI Locus Tag	PS417_RS06210
NCBI Old Locus Tag	PS417_22175
UniParc	UPI00049A2112
UniProtKB Acc	A0A060FLD6
UniProtKB ID	A0A060FLD6_9PSED
UniRef100	UniRef100_A0A060FLD6
UniRef50	UniRef50_M1WX56
UniRef90	UniRef90_C3JZ85

Product

Feature Type	CDS
Coding Frame	1
Product Name	amino acid transporter LysE
Synonyms
Evidence for Translation
Charge (pH 7)	4.58
Kyte-Doolittle Hydrophobicity Value	0.912
Molecular Weight (kDa)	21.1
Isoelectric Point (pI)	8.95

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003958 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PS417_RS06210 Search term: amino acid transporter LysE

Human Homologs

References