Strain | Pseudomonas simiae strain WCS417. [Details] | |
DNA Sequence Upstream of Gene |
TCTCTAATGAGCGATCAGCAATATTTGTTTTTCTTATACAGCCTGTGTCAGGAGAATAGCCAGCATCGCTTCTCTCTTTATAAGGAACCTCACATGGCTG GCGAAACCGCCCTGGCAACCCTGCTGCGCAGCATGAGCCCCCAGCTCAACGACGGCGACTATGTGTTCTGCAGCGTGCCTGACCACCGTATTCCTCCAGG GTGTGAGGTGATCGGCAGCTTTCACGAGCAGGAAGGCCTGACCCTGATCCTCGAACGCCAGCAAGCGGAACAGGCCGGCCTGGTGTTTGACTACGTCGCC GCGTGGATCACCTTGAACGTGCATTCGGCCCTGGAAGCCGTGGGCCTCACCGCCGCCTTCGCCAGTGCGTTGGGCAAGGCCGGCATCAGTTGCAACGTGA TTGCCGGCTATTACCACGACCACCTGTTCGTCGGGCGTGCCGACGCAGAACAGGCCATGCAGGTATTGCGGCAACTGGCAGTAGACGCGGAGTAAATCCT
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DNA Sequence for Gene |
>PS417_RS06210
ATGTGGCAAAGTTATTTGAATGGTTTGCTGGTGGCGCTGGGCCTGATCATGGCCATCGGCACCCAGAATGCCTTTGTACTGGCGCAGAGCCTGCGTCGTG AACATCACTTGCCAGTGGCTGCGCTGTGCGTGGTGTGTGACGCCCTGCTGGTGGCCGCGGGGGTGTTCGGCCTGGCCACGGTGCTGGCGCAAAGCCCGGT ACTGCTGGCGGTAGCGCGCTGGGGCGGCGCAGCGTTTCTGATCTGGTACGGTGCCTGCGCGCTGCGTCGGGCGTGTTCGAAACAGAGCCTGGACCAGGGC GACACGCTCAAGGTGCGCTCACTGCGCGCAGTGTTGCTGAGTGCGCTGGCCGTGACCTTGCTCAACCCCCACGTGTACCTGGACACCGTGCTGCTGATCG GCTCACTCGGTGCCCAACAGACCGAGCCCGGTGCCTACGTGGCCGGTGCCGCCAGCGCGTCATTCCTGTGGTTCACCACCCTGGCACTCGGGGCAGCATG GCTGGCACCCTGGCTCGCACGCCCCGCCACGTGGCGTCTGCTGGACCTGTTGGTGGCTGTGATGATGTTCAGCGTGGCCTATCAGTTGATCAGCGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGAATATTCCAAAACGCTCTGGAACCTCTATCCCACACAGTTGTTGCGTGGTTTTGCCGCCCCCCCGGTGCTATGATCCGGACCCTGCGCCGCAAAGAGT ACAAACTCCCCGGCGCTTGTTTGGCCGCCCGTGATCGGCCTTGCGCTCACCGCAACTGACCTGATTAGGAGAATCATCATGGCTTTCGAATTGCCGCCGC TGCCCTACGCACACGATGCCCTGCAGCCGCACATCTCCAAGGAAACCTTGGAGTATCACCACGACAAGCACCACAACACCTACGTCGTGAACCTGAACAA CCTGGTGCCAGGCACCGAGTTCGAAGGCAAGACCCTGGAAGAGATCGTCAAGTCCTCTTCGGGCGGCATCTTCAACAACGCCGCTCAGGTCTGGAACCAC ACCTTCTACTGGAACTGCCTGGCGCCAAACGCCGGTGGCCAACCGACCGGCGCGCTGGCTGAAGCCATCAACGCTGCGTTCGGTTCGTTCGACAAGTTCA
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Amino Acid Sequence |
>amino acid transporter LysE
MWQSYLNGLLVALGLIMAIGTQNAFVLAQSLRREHHLPVAALCVVCDALLVAAGVFGLATVLAQSPVLLAVARWGGAAFLIWYGACALRRACSKQSLDQG DTLKVRSLRAVLLSALAVTLLNPHVYLDTVLLIGSLGAQQTEPGAYVAGAASASFLWFTTLALGAAWLAPWLARPATWRLLDLLVAVMMFSVAYQLISA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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