Pseudomonas chlororaphis EA105, NZ35_RS21460

Gene Feature Overview

Strain	Pseudomonas chlororaphis EA105 GCF_000783395.1|latest
Locus Tag	NZ35_RS21460
NCBI Old Locus Tag	NZ35_21480
Name	Synonym: NZ35_21480
Replicon	contig_24
Genomic location	25454 - 29275 (+ strand)

Cross-References

RefSeq	WP_038366235.1
GI	740580461
INSDC	KHA71189.1
NCBI Locus Tag	NZ35_RS21460
NCBI Old Locus Tag	NZ35_21480
UniParc	UPI0005378671
UniProtKB Acc	A0A0A6D9D2
UniProtKB ID	A0A0A6D9D2_9PSED
UniRef100	UniRef100_A0A0A6D9D2
UniRef50	UniRef50_G8QBI3
UniRef90	UniRef90_A0A0A6D9D2

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion system protein ImpL
Synonyms
Evidence for Translation
Charge (pH 7)	-10.12
Kyte-Doolittle Hydrophobicity Value	-0.255
Molecular Weight (kDa)	143.1
Isoelectric Point (pI)	5.71

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003159 (327 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: NZ35_RS21460 Search term: type VI secretion system protein ImpL

Human Homologs

References