Pseudomonas sp. FH4, H097_RS03300

Gene Feature Overview

Strain	Pseudomonas sp. FH4 - Assembly GCF_000510915.2 GCF_000510915.2|latest
Locus Tag	H097_RS03300
NCBI Old Locus Tag	H097_24144
Name	Synonym: H097_24144
Replicon	scf_29086_60.1_contig_1
Genomic location	125137 - 127242 (+ strand)

Cross-References

RefSeq	WP_032862917.1
GI	696287203
INSDC	ETK15270.1
NCBI Locus Tag	H097_RS03300
NCBI Old Locus Tag	H097_24144
UniParc	UPI0003DD31BA
UniProtKB Acc	W2D787
UniProtKB ID	W2D787_9PSED
UniRef100	UniRef100_W2D787
UniRef50	UniRef50_Q3IJ73
UniRef90	UniRef90_Q87WQ8

Product

Feature Type	CDS
Coding Frame	1
Product Name	polynucleotide phosphorylase/polyadenylase
Synonyms
Evidence for Translation
Charge (pH 7)	-16.14
Kyte-Doolittle Hydrophobicity Value	-0.037
Molecular Weight (kDa)	75.0
Isoelectric Point (pI)	4.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004385 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H097_RS03300 Search term: polynucleotide phosphorylase/polyadenylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000400646 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 4.2e-113 Percent Identity: 35.9
Ensembl 110, assembly GRCh38.p14	ENSP00000393953 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 4.2e-113 Percent Identity: 35.9

References