Pseudomonas sp. FH4, H097_RS04180

Gene Feature Overview

Strain	Pseudomonas sp. FH4 - Assembly GCF_000510915.2 GCF_000510915.2|latest
Locus Tag	H097_RS04180
NCBI Old Locus Tag	H097_23244
Name	Synonym: H097_23244
Replicon	scf_29086_44.1_contig_1
Genomic location	10058 - 12004 (+ strand)

Cross-References

RefSeq	WP_032862693.1
GI	696286975
INSDC	ETK15709.1
NCBI Locus Tag	H097_RS04180
NCBI Old Locus Tag	H097_23244
UniParc	UPI0003DCDED8
UniProtKB Acc	W2D8J4
UniProtKB ID	W2D8J4_9PSED
UniRef100	UniRef100_W2D8J4
UniRef50	UniRef50_A0A085G4C7
UniRef90	UniRef90_I2BMI1

Product

Feature Type	CDS
Coding Frame	1
Product Name	DeoR faimly transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7)	-10.51
Kyte-Doolittle Hydrophobicity Value	-0.048
Molecular Weight (kDa)	72.0
Isoelectric Point (pI)	5.76

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3PJV	LYASE	11/10/10	Structure of Pseudomonas fluorescence LapD periplasmic domain	Pseudomonas fluorescens	1.7727	X-RAY DIFFRACTION	90.8

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001350 (454 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H097_RS04180 Search term: DeoR faimly transcriptional regulator

Human Homologs

References