Pseudomonas sp. FH4, H097_RS05565

Gene Feature Overview

Strain	Pseudomonas sp. FH4 - Assembly GCF_000510915.2 GCF_000510915.2|latest
Locus Tag	H097_RS05565
NCBI Old Locus Tag	H097_21838
Name	Synonym: H097_21838
Replicon	scf_29086_39.1_contig_1
Genomic location	13191 - 14249 (+ strand)

Cross-References

RefSeq	WP_032862411.1
GI	696286690
INSDC	ETK15803.1
NCBI Locus Tag	H097_RS05565
NCBI Old Locus Tag	H097_21838
UniParc	UPI0003DD46F4
UniProtKB Acc	W2D8Z1
UniProtKB ID	W2D8Z1_9PSED
UniRef100	UniRef100_W2D8Z1
UniRef50	UniRef50_Q6D1H8
UniRef90	UniRef90_E2XXJ0

Product

Feature Type	CDS
Coding Frame	1
Product Name	DNA polymerase IV
Synonyms
Evidence for Translation
Charge (pH 7)	3.48
Kyte-Doolittle Hydrophobicity Value	-0.300
Molecular Weight (kDa)	39.3
Isoelectric Point (pI)	8.06

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000889 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H097_RS05565 Search term: DNA polymerase IV

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000422094 DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183] E-value: 4.3e-42 Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14	ENSP00000425075 DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183] E-value: 4.3e-42 Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14	ENSP00000421997 DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183] E-value: 4.3e-42 Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14	ENSP00000241436 DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183] E-value: 4.3e-42 Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14	ENSP00000423532 DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183] E-value: 4.3e-42 Percent Identity: 32.6
Ensembl 110, assembly GRCh38.p14	ENSP00000424174 DNA polymerase kappa [Source:HGNC Symbol;Acc:HGNC:9183] E-value: 4.3e-42 Percent Identity: 32.6

References