Pseudomonas sp. FH4, H097_RS07050
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas sp. FH4 - Assembly GCF_000510915.2
GCF_000510915.2|latest |
| Locus Tag |
H097_RS07050
|
| NCBI Old Locus Tag | H097_20310 |
| Name |
Synonym: H097_20310 |
| Replicon | scf_29086_33.1_contig_1 |
| Genomic location | 3491 - 4366 (- strand) |
Cross-References
| RefSeq | WP_029300504.1 |
| GI | 657057779 |
| NCBI Locus Tag | H097_RS07050 |
| NCBI Old Locus Tag | H097_20310 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ABC transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -2.95 |
| Kyte-Doolittle Hydrophobicity Value | 0.008 |
| Molecular Weight (kDa) | 32.4 |
| Isoelectric Point (pI) | 6.42 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004529 (504 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: H097_RS07050
Search term: ABC transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value:
3.5e-13
Percent Identity:
25.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value:
3.5e-13
Percent Identity:
25.9
|
|
Ensembl
110, assembly
GRCh38.p14
|
ATP binding cassette subfamily A member 13 [Source:HGNC Symbol;Acc:HGNC:14638]
E-value:
3.5e-13
Percent Identity:
25.9
|
References
No references are associated with this feature.