Pseudomonas sp. FH4, H097_RS11055

Gene Feature Overview

Strain	Pseudomonas sp. FH4 - Assembly GCF_000510915.2 GCF_000510915.2|latest
Locus Tag	H097_RS11055
NCBI Old Locus Tag	H097_16216
Name	Synonym: H097_16216
Replicon	scf_29086_25.1_contig_1
Genomic location	215898 - 218342 (+ strand)

Cross-References

RefSeq	WP_032860973.1
GI	696285244
INSDC	ETK17541.1
NCBI Locus Tag	H097_RS11055
NCBI Old Locus Tag	H097_16216
UniParc	UPI0003DC9DA2
UniProtKB Acc	W2DFK6
UniProtKB ID	W2DFK6_9PSED
UniRef100	UniRef100_W2DFK6
UniRef50	UniRef50_A6T3T4
UniRef90	UniRef90_A0A075P4T8

Product

Feature Type	CDS
Coding Frame	1
Product Name	ligand-gated channel protein
Synonyms
Evidence for Translation
Charge (pH 7)	-13.92
Kyte-Doolittle Hydrophobicity Value	-0.356
Molecular Weight (kDa)	88.7
Isoelectric Point (pI)	5.22

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001486 (1037 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H097_RS11055 Search term: ligand-gated channel protein

Human Homologs

References