Pseudomonas sp. FH4, H097_RS21630

Gene Feature Overview

Strain	Pseudomonas sp. FH4 - Assembly GCF_000510915.2 GCF_000510915.2|latest
Locus Tag	H097_RS21630
NCBI Old Locus Tag	H097_05311
Name	Synonym: H097_05311
Replicon	scf_29086_9.1_contig_1
Genomic location	83524 - 86691 (+ strand)

Cross-References

RefSeq	WP_032858028.1
GI	696282116
INSDC	ETK20010.1
NCBI Locus Tag	H097_RS21630
NCBI Old Locus Tag	H097_05311
UniParc	UPI0003DB6C02
UniProtKB Acc	W2DKM6
UniProtKB ID	W2DKM6_9PSED
UniRef100	UniRef100_W2DKM6
UniRef50	UniRef50_P24177
UniRef90	UniRef90_C3KBN3

Product

Feature Type	CDS
Coding Frame	1
Product Name	multidrug transporter
Synonyms
Evidence for Translation
Charge (pH 7)	-7.34
Kyte-Doolittle Hydrophobicity Value	0.311
Molecular Weight (kDa)	113.0
Isoelectric Point (pI)	5.51

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name	Definition	Accession	Model Type (?)	SNP	Cutoff	Bit Score	Percent Identity	CARD Version
adeF	AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879]	ARO:3000777	protein homolog model		Strict	758.8	41.9	3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000417 (2093 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H097_RS21630 Search term: multidrug transporter

Human Homologs

References