Pseudomonas sp. RIT357, BW43_RS24765

Gene Feature Overview

Strain	Pseudomonas sp. RIT357 GCF_000632245.1|latest
Locus Tag	BW43_RS24765
NCBI Old Locus Tag	BW43_00488
Name	Synonym: BW43_00488
Replicon	contigs1
Genomic location	517108 - 518604 (+ strand)

Cross-References

RefSeq	WP_032884437.1
GI	696308965
INSDC	EZP69439.1
NCBI Locus Tag	BW43_RS24765
NCBI Old Locus Tag	BW43_00488
UniParc	UPI0004455B0B
UniProtKB Acc	A0A031J6I7
UniProtKB ID	A0A031J6I7_9PSED
UniRef100	UniRef100_A0A031J6I7
UniRef50	UniRef50_Q4K3N7
UniRef90	UniRef90_Q4K3N7

Product

Feature Type	CDS
Coding Frame	1
Product Name	EvpB family type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7)	-14.27
Kyte-Doolittle Hydrophobicity Value	-0.449
Molecular Weight (kDa)	55.7
Isoelectric Point (pI)	5.10

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
5N8N	STRUCTURAL PROTEIN	02/23/17	Contracted sheath of a Pseudomonas aeruginosa type six secretion system consisting of TssB1 and TssC1	Pseudomonas aeruginosa	3.28	ELECTRON MICROSCOPY	93.7

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000083 (1225 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BW43_RS24765 Search term: EvpB family type VI secretion protein

Human Homologs

References