Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS19905

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. actinidiae ICMP 9617
GCF_000658965.1|latest
Locus Tag
A250_RS19905
NCBI Old Locus TagA250_06004
Name
Synonym: A250_06004
Replicon chromosome Chr
Genomic location 1435451 - 1438585 (- strand)

Cross-References

RefSeq WP_017698910.1
GI 516295603
NCBI Locus Tag A250_RS19905
NCBI Old Locus Tag A250_06004

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug transporter
Synonyms
Evidence for Translation
Charge (pH 7) -5.13
Kyte-Doolittle Hydrophobicity Value 0.305
Molecular Weight (kDa) 112.4
Isoelectric Point (pI) 5.99

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] ARO:3000777 protein homolog model Strict 765.4 42.69 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs 1 predicted inparalogs
acriflavine resistance protein B (A250_RS15285) 50.7% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: A250_RS19905

Human Homologs

References

No references are associated with this feature.