Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS19905

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas syringae pv. actinidiae ICMP 9617 chromosome Chr, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CAGGCGACAACGCCGCCAAGGTCAAGCTGACCCTGGAAGACAACAGCGTTTACGCTCAGGAAGGCAAACTGGAATTCTCCGAAGTGTCGGTTGACCAGAC CACTGGCTCCGTCACCCTGCGCGCAGTCTTCCCGAACCCTGAACACCGCTTGCTGCCAGGCATGTTCGTTCACGCGCAATTGCAGGCAGGCGTCAATGCG AAAGCCATTCTGGCACCGCAACAGGGCGTGACCCGCGACCTGAAAGGCACGCCGACCGCCATGATTGTCAATCAGGACAACAAGGTTGAATTGCGCACAC TGGTCGCCAACCGCACCGTGGGCAGCGACTGGCTGATCGAGGACGGCCTGAAAGAAGGCGATCGCGTGATCACCGAAGGTCTGCAATACGTCAAACCAGG CGCAGAAGTGAAAGCTGCCGAAGCGACCAACGTCAAAGGAGCAAACCCGGCACCTGCCCCGGCCACTGAAAAAGCCGCAGGCAGCAAAGGGGAGTAACCC
DNA Sequence for Gene
>A250_RS19905
ATGTCGAAATTTTTTATTGATCGGCCCATTTTTGCCTGGGTTATTGCCCTCGTGATCATGCTGGTCGGTGCGCTGTCCATTTCCAGCCTGCCGATCAACC AGTACCCAAGTATCGCGCCACCCGCCATTGCGATTCAGGTGACCTACCCGGGCGCTTCTGCACAGACCGTGCAGGACACCGTGGTGCAGGTCATCGAGCA GCAGCTCAACGGCATCGACAACCTGCGTTATGTGAGTTCGGAAAGTAACTCCGACGGCAGCATGACCATTACCGCGACGTTCAATCAGGGCACCAACCCG GATACGGCGCAGGTGCAGGTGCAGAACAAGCTCAACCTGGCGACCCCGCTGCTGCCACAGGAAGTGCAGCAACAGGGTATTCGCGTGACCAAGGCGGTGA AGAACTTCCTGATGGTCATCGGCCTGGTGTCCGAAGACGGCAGCATGGGCAAGGAAGACCTGGCCAACTACATCGTGTCGAACATGCAGGACCCGATTTC CCGGACCTCCGGTGTGGGCGACTTCCAGGTGTTCGGCTCCCAGTACGCCATGCGTATCTGGCTGGACCCGGCCAAGCTGAACAACTTCCAGCTGACGCCA GTGGATGTGAGAACCGCGATTACTGCGCAGAACGTTCAGGTGTCGTCCGGTCAGTTGGGCGGTCTGCCCTCGATCAGCGGCCAGCAACTGAACGCCACAA TCATCGGCAAGACGCGTCTGCAGACGGCTGAACAGTTCGGCAATATCTTCCTCAAGGTCAACACCGACGGTTCACAGGTTCGCCTGAAAGACGTCGCCAC CGTTGGCCTGGGCGCAGAGAACTACAGCACCGACTCGCAGTTCGACGGCAAACCGGCCTCGGGCCTGGCGATCAAGCTGGCCACCGGCGCCAATGCGCTG GACACCGCCAAGGCCATCCGCGCGACCGTTTCGTCGCTGGAGCCGTTTTTCCCGCCTGGCATGAAAGTGGTTTACCCGTACGACACCACGCCTGTGGTGA GCGAATCGATCAAAGGTGTGGTTCACACGCTGATTGAAGCCATCGTGCTGGTGTTCCTGGTGATGTACCTGTTCCTGCAAAACTTCCGCGCCACCGTGAT CACCACGCTGACGGTTCCGGTTGTACTGTTGGGCACCTTCGGCATCCTCGCGGGCTTCGGTTTCACCATCAACACCCTGACCATGTTCGGCATGGTACTG GCCATCGGCTTGCTGGTGGACGATGCTATTGTGGTGGTGGAAAACGTCGAGCGGGTGATGGAGGAAGAAAAGCTTTCTCCGCGTGACGCAACCATCAAAT CCATGACGCAGATCCAGGGCGCACTGGTCGGTATTGCGCTGGTGCTGTCGGCCGTTCTGCTGCCAATGGCGTTCTTCGGCGGCTCGACCGGTGTGATCTA CAAGCAGTTCTCGATCACCATCGTCTCGGCCATGGCCCTGTCGGTAGTGGTCGCGCTGATCTTCACCCCGGCGCTGTGCGCCACCATGCTCAAGCCTATC GACGAGAAAACCCACGGCCAGCCCAAGCGTGGTTTCTTCGGCTGGTTCAACCGCACCTTCGACCGCAGCGTTCTGAGTTACGAGCGCGGCGTGGGTAACA TGCTCAAGCACAAGTGGCTGTCGTACCTGGGCTACATCGTGATTTTTGCGGGCATGATCTTCATGTTCATGCGCATTCCCGCAGCGTTCCTTCCGGACGA AGATCAGGGCGTAATCTTTGCCCAGATCCAGACACCGGCCGGCTCCTCGACCGAGCGCACGCAAGAAGTCATCGACAACATGCGTGAGTACCTACTGACC AAGGAAAGCGGTGCAGTGAAGTCGGTGTTCTCGGTGAACGGCTTCAACTTTGCGGGCCGCGGTCAAAGCTCGGCGATTGCATTTGTCATGCTCAAACCGT GGGAAGAACGTGACGCCGAAAACAGCGTCTTCAAACTGGCAGCGCGCGCTCAGGGCTATTTCTTCAGCCTGCGCGATGCAATGGTGTTCGCCATCGTGCC GCCGTCGGTACTGGAGCTGGGTAACGCAACAGGCTTCGACGTCTATCTGCAGGATCAGGGCGGTGTCGGTCACGAAAAACTGATGGAAGCGCGTAACCAG TTCCTGGGCATGGCCGCGCAGAGCAAGATTCTCGCCGGTATGCGTCCGAACGGGCTGAATGACGAGCCGCAGTACCAGTTGATCATCGACGACGAACGCG CCAGTGCGTTGGGCATTACTCTGTCGGACATCAACAACACACTGTCCATCGCATTGGGTGGCAGCTACGTCAATGACTTCATCGACCGTGGCCGTGTGAA GAAGGTGTACATCCAGGGTGATGCAGGTGCCCGTATGACGCCTGAAGACCTGAAAAAATGGTACGTGCGCAACAGCGCGGGCGAAATGGTGCCGTTCTCG GCCTTCGCCAGCGGCAAGTGGACCTACGGTTCGCCAAAACTGTCGCGCTACAACGGCGTGGCGGCAGAGGAAATCCTCGGTACGCCGGCACCGGGCTACA GCAGCGGCGATGCAATGGCCGAAGTTGAAGCGCTGGCCAAGAAACTGCCGCAAGGTATCGGCATTTCCTGGACCGGTCTGTCCTACGAGGAGCGCTTGTC CGGCTCCCAGGCCCCTGCCCTTTACGCACTGTCGTTGCTGGTCGTGTTCCTGTGTCTGGCGGCGCTGTATGAAAGCTGGTCGATCCCGATCGCGGTCATT CTCGTGGTACCGCTGGGGGTTATCGGCGCACTGATGGCAACCAGCCTGCGCGGACTGTCGAACGACGTGTTCTTCCAGGTCGGGTTGCTGGTCACAGTCG GGTTGGCGGCGAAGAACGCCATCCTGATCGTCGAGTTCGCCAAAGAGCTGCACGAACAGGGCAAGAGCCTGACCGATGCTGCGATCGAAGCCTGTCGCAT GCGCCTGCGCCCGATCATCATGACGTCCATGGCGTTTATCCTCGGCGTTGTGCCGCTGGCGATTTCCTCGGGCGCAGGTTCGGGCAGTCAGCATTCGATC GGTACGGGCGTAATTGGCGGTATGATCACAGCCGTTGTCCTGGCGATCTTCTGGGTGCCACTGTTCTTCGTATCGATTTCAGGGCTCTTCAAGAGCAAGC AGAAACATATTTCACACGATGAGGCTGGCCAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
GCAAGTCATTGATCTCTCTTGCAGTTACCGCGTTCATACTCGGCGGCTGCTCTTTGATCCCTGAGTACAAGCAGCCGGAAGCACCGGTCGCCGCACAATA CCCGCAAGGCCCGGCCTACTCGCCGGTCGAAGGGGCCAAAATGGCCGCTGCGGAGCAAGGCTGGCGTCATTTCTTCAATGACCCGGCGCTGCAACAGCTG ATCGAGACCGCGCTGCTCAATAACCGTGACCTGCGGGTTGCGGCGCTGAACATCGACGCTTACCGTGCGCAGTACCGCATCCAGCGTTCAGACCTGTTCC CGGCGGTCTCGGCCACCGGCAGCGGCTCACGTCAGCGCGTGCCTGCCGACCAGACGCAGACCGGCCAATCGGCGATCAGCAGCAGCTATTCGGCAACGCT GGGCGTCAGCGCCTACGAGCTGGACCTGTTTGGTCGGGTGCGCAGCCTCAGCGAACAGGCGCTGGAAACCTACTTCTCCAGTGAAGAAGCACGTCGCAGC
Amino Acid Sequence
>multidrug transporter
MSKFFIDRPIFAWVIALVIMLVGALSISSLPINQYPSIAPPAIAIQVTYPGASAQTVQDTVVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFNQGTNP DTAQVQVQNKLNLATPLLPQEVQQQGIRVTKAVKNFLMVIGLVSEDGSMGKEDLANYIVSNMQDPISRTSGVGDFQVFGSQYAMRIWLDPAKLNNFQLTP VDVRTAITAQNVQVSSGQLGGLPSISGQQLNATIIGKTRLQTAEQFGNIFLKVNTDGSQVRLKDVATVGLGAENYSTDSQFDGKPASGLAIKLATGANAL DTAKAIRATVSSLEPFFPPGMKVVYPYDTTPVVSESIKGVVHTLIEAIVLVFLVMYLFLQNFRATVITTLTVPVVLLGTFGILAGFGFTINTLTMFGMVL AIGLLVDDAIVVVENVERVMEEEKLSPRDATIKSMTQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMALSVVVALIFTPALCATMLKPI DEKTHGQPKRGFFGWFNRTFDRSVLSYERGVGNMLKHKWLSYLGYIVIFAGMIFMFMRIPAAFLPDEDQGVIFAQIQTPAGSSTERTQEVIDNMREYLLT KESGAVKSVFSVNGFNFAGRGQSSAIAFVMLKPWEERDAENSVFKLAARAQGYFFSLRDAMVFAIVPPSVLELGNATGFDVYLQDQGGVGHEKLMEARNQ FLGMAAQSKILAGMRPNGLNDEPQYQLIIDDERASALGITLSDINNTLSIALGGSYVNDFIDRGRVKKVYIQGDAGARMTPEDLKKWYVRNSAGEMVPFS AFASGKWTYGSPKLSRYNGVAAEEILGTPAPGYSSGDAMAEVEALAKKLPQGIGISWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESWSIPIAVI LVVPLGVIGALMATSLRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQGKSLTDAAIEACRMRLRPIIMTSMAFILGVVPLAISSGAGSGSQHSI GTGVIGGMITAVVLAIFWVPLFFVSISGLFKSKQKHISHDEAGQ
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site