Pseudomonas syringae UB0390, IV03_RS20890
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae UB0390
GCF_000737225.1|latest |
| Locus Tag |
IV03_RS20890
|
| NCBI Old Locus Tag | IV03_02215 |
| Name |
Synonym: IV03_02215 |
| Replicon | contig3.1 |
| Genomic location | 146808 - 148859 (+ strand) |
Cross-References
| RefSeq | WP_032611698.1 |
| GI | 695634146 |
| NCBI Locus Tag | IV03_RS20890 |
| NCBI Old Locus Tag | IV03_02215 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ligand-gated channel
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -20.09 |
| Kyte-Doolittle Hydrophobicity Value | -0.472 |
| Molecular Weight (kDa) | 74.5 |
| Isoelectric Point (pI) | 4.80 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000149 (2669 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: IV03_RS20890
Search term: ligand-gated channel
|
Human Homologs
References
No references are associated with this feature.